Coordination polymer

Figure 1. An illustration of 1- 2- and 3-dimensionality.

A coordination polymer is an inorganic or organometallic polymer structure containing metal cation centers linked by organic ligands. More formally a coordination polymer is a coordination compound with repeating coordination entities extending in 1, 2, or 3 dimensions.[1]

It can also be described as a polymer whose repeat units are coordination complexes. Coordination polymers contain the subclass coordination networks that are coordination compounds extending, through repeating coordination entities, in 1 dimension, but with cross-links between two or more individual chains, loops, or spiro-links, or a coordination compound extending through repeating coordination entities in 2 or 3 dimensions. A subclass of these are the metal-organic frameworks, or MOFs, that are coordination networks with organic ligands containing potential voids.[1]

Coordination polymers are relevant to many fields such as organic and inorganic chemistry, biochemistry, materials science, electrochemistry, and pharmacology, having many potential applications.[2] This interdisciplinary nature has led to extensive study in the past few decades.[3]

Coordination polymers can be classified in a number of different ways according to their structure and composition. One important classification is referred to as dimensionality. A structure can be determined to be one-, two- or three-dimensional, depending on the number of directions in space the array extends in. A one-dimensional structure extends in a straight line (along the x axis); a two-dimensional structure extends in a plane (two directions, x and y axes); and a three-dimensional structure extends in all three directions (x, y, and z axes).[4] This is depicted in Figure 1.

History

The Nobel Prizewinning work of Alfred Werner and his contemporaries laid the groundwork for the study of coordination polymers. Terms ubiquitous in the field, such as coordination number, were coined by Werner. Many time honored materials are now recognized as coordination polymers. These include the cyanide complexes Prussian blue and Hofmann clathrates.[5]

Synthesis and Propagation

Coordination polymers are often prepared by self-assembly, involving crystallization of a metal salt with a ligand. The mechanisms of crystal engineering and molecular self-assembly are relevant.[2]

Figure 2. Shows planar geometries with 3 coordination and 6 coordination.

The synthesis methods utilized to produce coordination polymers are generally the same methods used to grow any crystal. These generally include solvent layering (slow diffusion), slow evaporation, and slow cooling. (Because the main method of characterization of coordination polymers is X-ray crystallography, growing a crystal of sufficient size and quality is important.)

Intermolecular forces and bonding

Forces that determine metal-ligand complexes include van der Waals forces, pi-pi interactions, hydrogen bonding, and stabilization of pi bonds by polarized bonds in addition to the coordination bond formed between the metal and the ligand. These intermolecular forces tend to be weak, with a long equilibrium distance (bond length) compared to covalent bonds. The pi-pi interactions between benzene rings, for example, have energy roughly 5-10 kJ/mol and optimum spacing 3.4-3.8 Ångstroms between parallel faces of the rings.

Coordination

The crystal structure and dimensionality of the coordination polymer is determined by the functionality of the linker and the coordination geometry of the metal center. Dimensionality is generally driven by the metal center which can have the ability to bond to as 16 functional sites on linkers. This number of possible bonds is the coordination number. Coordination numbers are more often between 2 and 10, and the bonding sites are separated by distinct angles. Coordination numbers are shown in planar geometry in Figure 2. In Figure 1 the 1D structure is 2-coordinated, the planar is 4-coordinated, and the 3D is 6-coordinated. Figure 3 shows structures hinting at the complexity that is possible by changing coordination geometry.

Metal centers

Figure 3. Three coordination polymers of different dimensionality. All three were made using the same ligand (4,5-dihydroxybenzene-1,3-disulfonate (L)), but different metal cations. All of the metals come from Group 2 on the periodic table (alkaline earth metals) and in this case, dimensionality increases with cation size and polarizability. A. [Ca(L)(H2O)4]•H2O B. [Sr(L)(H2O)4]•H2O C.[Ba(L)(H2O)]•H2O[6] In each case, the metal is represented in green.

Metal Centers, also called nodes or hubs, bond to a specific number of linkers at well defined angles. The number of linkers bound to a node is known as the coordination number, which, along with the angles they are held at, determines the dimensionality of the structure. The coordination number and coordination geometry of a metal center is determined by the nonuniform distribution of electron density around it, and in general the coordination number increases with cation size. Several models, most notably hybridization model and molecular orbital theory, use the Schrödinger equation to predict and explain coordination geometry, however this is difficult in part because of the complex effect of environment on electron density distribution.[7]

Transition metals

Transition metals are commonly used as nodes. Partially filled d orbitals, either in the atom or ion, can hybridize differently depending on environment. This electronic structure causes some of them to exhibit multiple coordination geometries, particularly copper and gold ions which as neutral atoms have full d-orbitals in their outer shells.

Lanthanides

Lanthanides are large atoms with coordination numbers varying from 7 to 10. Their coordination environment can be difficult to predict, making them challenging to use as nodes. They offer the possibility of incorporating luminescent components.

Alkali metals and alkaline earth metals

Alkali metals and alkaline earth metals exist as stable cations. Alkali metals readily form cations with stable valence shells, giving them different coordination behavior than lanthanides and transition metals. They are strongly effected by the counterion from the salt used in synthesis, which is difficult to avoid. The coordination polymers shown in Figure 3 are all group two metals. In this case, the dimensionality of these structures increases as the radius of the metal increases down the group (from calcium to strontium to barium).

Ligands

In most coordination polymers, a ligand (atom or group of atoms) will formally donate a lone pair of electrons to a metal cation and form a coordination complex via a Lewis acid/ base relationship (Lewis acids and bases). Coordination polymers are formed when a ligand has the ability to form multiple coordination bonds and act as a bridge between multiple metal centers. Ligands that can form one coordination bond are referred to as monodentate, but those which form multiple coordination bonds, which could lead to coordination polymers are called polydentate. Polydentate ligands are particularly important because it is through ligands that connect multiple metal centers together that an infinite array is formed. Polydentate ligands can also form multiple bonds to the same metal (which is called chelation). Monodentate ligands are also referred to as terminal because they do not offer a place for the network to continue. Often, coordination polymers will consist of a combination of poly- and monodentate, bridging, chelating, and terminal ligands.

Chemical composition

Almost any type of atom with a lone pair of electrons can be incorporated into a ligand. Ligands that are commonly found in coordination polymers include polypyridines, phenanthrolines, hydroxyquinolines and polycarboxylates. Oxygen and nitrogen atoms are commonly encountered as binding sites, but other atoms, such as sulfur[8] and phosphorus,[9][10] have been observed.

Figure 4. A flexible ligand in both a gauche and anti conformation.

Ligands and metal cations tend to follow hard soft acid base theory (HSAB) trends. This means that larger, more polarizable soft metals will coordinate more readily with larger more polarizable soft ligands, and small, non-polarizable, hard metals coordinate to small, non-polarizable, hard ligands.

Structural orientation

Ligands can be flexible or rigid. A rigid ligand is one that has no freedom to rotate around bonds or reorient within a structure. Flexible ligands can bend, rotate around bonds, and reorient themselves. This creates more variety in the structure. There are examples of coordination polymers that include two configurations of the same ligand within one structure,[11] as well as two separate structures where the only difference between them is ligand orientation. An example of a flexible ligand is shown in Figure 4.

Ligand length

A length of the ligand can be an important factor in determining possibility for formation of a polymeric structure versus non-polymeric (mono- or olygomeric) structures.[12]

Other factors

Figure6. The addition and removal of guest molecules can have a large effect on the resulting structure of a coordination polymer. A few examples are (top) change of a linear 1D chain to a zigzag pattern, (middle) staggered 2D sheets to stacked, and (bottom) 3D cubes become more widely spaced.

Counterion

Besides metal and ligand choice, there are many other factors that affect the structure of the coordination polymer. For example, most metal centers are positively charged ions which exist as salts. The counterion in the salt can affect the overall structure. For example, silver salts such as AgNO3, AgBF4, AgClO4, AgPF6, AgAsF6 and AgSbF are all crystallized with the same ligand, the structures vary in terms of the coordination environment of the metal, as well as the dimensionality of the entire coordination polymer.[13]

Crystallization environment

Additionally, variations in the crystallization environment can also change the structure. Changes in pH,[14] exposure to light, or changes in temperature[15] can all change the resulting structure. Influences on the structure based on changes in crystallization environment are determined on a case by case basis.

Guest molecules

The structure of coordination polymers often incorporates empty space in the form of pores or channels. This empty space is thermodynamically unfavorable. In order to stabilize the structure and prevent collapse, the pores or channels are often occupied by guest molecules. Guest molecules do not form bonds with the surrounding lattice, but sometimes interact via intermolecular forces, such as hydrogen bonding or pi stacking. Most often, the guest molecule will be the solvent that the coordination polymer was crystallized in, but can really be anything (other salts present, atmospheric gases such as oxygen, nitrogen, carbon dioxide, etc.) The presence of the guest molecule can sometimes influence the structure by supporting a pore or channel, where otherwise none would exist. Figure 5 shows a schematic of a few different ways a structure can change upon the addition or evacuation of a guest molecule.

Applications

Coordination polymers are commercialized as dyes. Particularly useful are derivatives of aminophenol. Metal complex dyes using copper or chromium are commonly used for producing dull colors. Tridentate ligand dyes are useful because they are more stable than their bi- or mono-dentate counterparts.[16][17]

One of the early commercialized coordination polymers are the Hofmann compounds, which have the formula Ni(CN)4Ni(NH3)2. These materials crystallize with small aromatic guests (benzene, certain xylenes), and this selectivity has been exploited commercially for the separation of these hydrocarbons.[18]

Research trends

Molecular storage

Although of not yet practical, porous coordination polymers have potential as molecular sieves in parallel with porous carbon and zeolites.[5] The size and shapes of the pore can be controlled by the linker size and the connecting ligands’ length and functional groups. To modify the pore size in order to achieve effective adsorption, nonvolatile guests are intercalated in the porous coordination polymer space to decrease the pore size. Active surface guests can also be used contribute to adsorption. For example, the large-pore MOF-177, 11.8 Å in diameter, can be doped by C60 molecules (6.83 Å in diameter) or polymers with a highly conjugated system in order to increase the surface area for H2 adsorption.

Flexible porous coordination polymers are potentially attractive for molecular storage, since their pore sizes can be altered by physical changes. An example of this might be seen in a polymer that contains gas molecules in its normal state, but upon compression the polymer collapses and releases the stored molecules. Depending on the structure of the polymer, it is possible that the structure be flexible enough that collapsing the pores is reversible and the polymer can be reused to uptake the gas molecules again.[19] The Metal-organic framework page has a detailed section dealing with H2 gas storage.

Luminescence

Luminescent coordination polymers typically feature organic chromophoric ligands, which absorb light and then pass the excitation energy to the metal ion. Coordination polymers are potentially the most versatile luminescent species due to their emission properties being coupled with guest exchange. Luminescent supramolecular architectures have recently attracted much interest because of their potential applications in optoelectronic devices or as fluorescent sensors and probes. Coordination polymers are often more stable (thermo- and solvent-resistant) than purely organic species. For ligands that fluoresce without the presence of the metal linker (not due to LMCT), the intense photoluminescence emission of these materials tend to be magnitudes of order higher than that of the free ligand alone. These materials can be used for designing potential candidates for light emitting diode (LED) devices. The dramatic increase in fluorescence is caused by the increase in rigidity and asymmetry of the ligand when coordinated to the metal center.[20]

Electrical conductivity

Figure 7. Structure of coordination polymers that exhibit conductivity, where M = Fe, Ru, OS; L = octaethylporphyrinato or pthalocyaninato; N belongs to pyrazine or bipyridine.

Coordination polymers can have short inorganic and conjugated organic bridges in their structures, which provide pathways for electrical conduction. Some one-dimensional coordination polymers built as shown in the figure exhibit conductivities in a range of 1x10−6 to 2x10−1 S/cm. The conductivity is due to the interaction between the metal d-orbital and the pi* level of the bridging ligand. In some cases coordination polymers can have semi-conductor behavior. Three-dimensional structures consisting of sheets of silver-containing polymers demonstrate semi-conductivity when the metal centers are aligned, and conduction decreases as the silver atoms go from parallel to perpendicular.[20]

Magnetism

Coordination polymers exhibit many kinds of magnetism. Antiferromagnetism, ferrimagnetism, and ferromagnetism are cooperative phenomena of the magnetic spins within a solid arising from coupling between the spins of the paramagnetic centers. In order to allow efficient magnetic, metal ions should be bridged by small ligands allowing for short metal-metal contacts (such as oxo, cyano, and azido bridges).[20]

Sensor capability

Coordination polymers can also show color changes upon the change of solvent molecules incorporated into the structure. An example of this would be the two Co coordination polymers of the [Re6S8(CN)6]4− cluster that contains water ligands that coordinate to the cobalt atoms. This originally orange solution turns either purple or green with the replacement of water with tetrahydrofuran, and blue upon the addition of diethyl ether. The polymer can thus act as a solvent sensor that physically changes color in the presence of certain solvents. The color changes are attributed to the incoming solvent displacing the water ligands on the cobalt atoms, resulting in a change of their geometry from octahedral to tetrahedral.[20]

References

  1. 1 2 Batten, Stuart R.; Champness, Neil R.; Chen, Xiao-Ming; Garcia-Martinez, Javier; Kitagawa, Susumu; Öhrström, Lars; O'Keeffe, Michael; Suh, Myunghyun P.; Reedijk, Jan (2013). "Terminology of metal–organic frameworks and coordination polymers (IUPAC Recommendations 2013)" (PDF). Pure and Applied Chemistry (IUPAC) 85 (8): 1715. doi:10.1351/PAC-REC-12-11-20.
  2. 1 2 Fromm, K. (2008). "Coordination polymer networks with s-block metal ions". Coord. Chem. Rev. 252 (8–9): 856–885. doi:10.1016/j.ccr.2007.10.032.
  3. ↑ Yang, Y.; Jiang, G.; Li, Y. Z.; Bai, J.; Pan, Y.; You, X. Z. (2006). "Synthesis, structures and properties of alkaline earth metal benzene-1,4-dioxylacetates with three-dimensional hybrid networks". Inorganica Chimica Acta 359 (10): 3257. doi:10.1016/j.ica.2006.03.038.
  4. ↑ Chen, X; Ye, B.; Tong, M. (2005). "Metal-organic molecular architectures with 2,2′-bipyridyl-like and carboxylate ligands". Coord. Chem. Rev (Elsevier) 249 (5–6): 545–565. doi:10.1016/j.ccr.2004.07.006.
  5. 1 2 Kitagawa, S.; Kitaura, R.; Noro, S. I. (2004). "Functional Porous Coordination Polymers". Angewandte Chemie International Edition 43 (18): 2334. doi:10.1002/anie.200300610.
  6. ↑ Cote, A; Shimizu, G. (2003). "Coordination Solids via Assembly of Adaptable Components : Systematic Structural Variation in Alkaline Earth Organosulfonate Networks". Chem. Eur. J. (Wiley) 9 (21): 5361–5370. doi:10.1002/chem.200305102. PMID 14613146.
  7. ↑ Bernstein, Jeremy; Paul M. Fishbane; Stephen G. Gasiorowicz (April 3, 2000). Modern Physics. Prentice-Hall. p. 624. ISBN 978-0-13-955311-0.
  8. ↑ Wen, M.; Munakata, M.; Suenaga, Y.; Kuroda-Sowa, T.; Maekawa, M.; Yan, S. G. (2001). "Silver(I) coordination polymers of cyclic sulfur ligand, 2,2′,3,3′-tetrahydro-4,4′-dithia-1,1′-binaphthylidene". Inorganica Chimica Acta 322: 133. doi:10.1016/S0020-1693(01)00556-4.
  9. ↑ Hung-Low, F.; Klausmeyer, K. K.; Gary, J. B. (2009). "Effect of anion and ligand ratio in self-assembled silver(I) complexes of 4-(diphenylphosphinomethyl)pyridine and their derivatives with bipyridine ligands". Inorganica Chimica Acta 362 (2): 426. doi:10.1016/j.ica.2008.04.032.
  10. ↑ Ricci, G.; Sommazzi, A.; Masi, F.; Ricci, M.; Boglia, A.; Leone, G. (2010). "Well-defined transition metal complexes with phosphorus and nitrogen ligands for 1,3-dienes polymerization". Coordination Chemistry Reviews 254 (5–6): 661. doi:10.1016/j.ccr.2009.09.023.
  11. ↑ Knaust, J. M.; Keller, S. W. (2002). "A Mixed-Ligand Coordination Polymer from the in Situ, Cu(I)-Mediated Isomerization of Bis(4-pyridyl)ethylene". Inorganic Chemistry 41 (22): 5650. doi:10.1021/ic025836c. PMID 12401066.
  12. ↑ "Dimeric versus polymeric coordination in copper(ii) cationic complexes with bis(chelating) oxime and amide ligands - Dalton Transactions (RSC Publishing)". pubs.rsc.org. Retrieved 2015-09-24.
  13. ↑ Carlucci, L.; Ciani, G.; Proserpio, D. M.; Rizzato, S. (2002). "New polymeric networks from the self-assembly of silver(i) salts and the flexible ligand 1,3-bis(4-pyridyl)propane (bpp). A systematic investigation of the effects of the counterions and a survey of the coordination polymers based on bpp". CrystEngComm 4 (22): 121. doi:10.1039/b201288j.
  14. ↑ Ni, L. B.; Zhang, R. H.; Liu, Q. X.; Xia, W. S.; Wang, H.; Zhou, Z. H. (2009). "PH- and mol-ratio dependent formation of zinc(II) coordination polymers with iminodiacetic acid: Synthesis, spectroscopic, crystal structure and thermal studies". Journal of Solid State Chemistry 182 (10): 2698. Bibcode:2009JSSCh.182.2698N. doi:10.1016/j.jssc.2009.06.042. PMID 20161370.
  15. ↑ Tong, M. L.; Hu, S.; Wang, J.; Kitagawa, S.; Ng, S. W. (2005). "Supramolecular Isomerism in Cadmium Hydroxide Phases. Temperature-Dependent Synthesis and Structure of Photoluminescent Coordination Polymers of α- and β-Cd2(OH)2(2,4-pyda)". Crystal Growth & Design 5 (3): 837. doi:10.1021/cg049610r.
  16. ↑ Grychtol, K.; Mennicke, W. (2002) “Metal-Complex Dyes.” In Ullmann’s Encyclopedia of Industrial Chemistry. Wiley-VCH. doi:10.1002/14356007.a16_299.
  17. ↑ Hunger, K.; Mischke, P.; Rieper, W.; Raue, R.; Kunde, K.; Engel, A. (2002) “Azo Dyes.” In Ullmann’s Encyclopedia of Industrial Chemistry. Wiley-VCH. doi:10.1002/14356007.a03_245.
  18. ↑ Atwood, J. L. (2012) "Inclusion Compounds" in Ullmann's Encyclopedia of Industrial Chemistry. Wiley-VCH, Weinheim. doi: 10.1002/14356007.a14_119
  19. ↑ Bureekaew, S.; Shimomura, S.; Kitagawa, S. (2008). "Chemistry and application of flexible porous coordination polymers". Science and Technology of Advanced Materials 9: 014108. Bibcode:2008STAdM...9a4108B. doi:10.1088/1468-6996/9/1/014108.
  20. 1 2 3 4 Batten, Stuart R. (2008). Coordination Polymers: Design, Analysis and Application. RSC Publishing. pp. 297–307, 396–407. doi:10.1039/9781847558862. ISBN 978-0-85404-837-3.
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