Force field implementation
This is a table of computer programs implementing molecular mechanics force fields.
OPLS | AMBER | CHARMM | GAFF | MMFF | QVBMM | UFF | Comments | |
---|---|---|---|---|---|---|---|---|
Abalone | UA | 94, 96, 99SB, 03, GS, i | (+)[1] | for proteins and DNA | ||||
ACEMD | + | + | + | + | ||||
AMBER | + | + | +[2] | + | ||||
ArgusLab | + | + | addition to Quantum Chemistry | |||||
Ascalaph Designer | UA | 94, 99SB, 03 | ||||||
Avogadro | + | 94, 94s | + | |||||
Balloon | 94 | "MMFF94-like" | ||||||
BOSS | + | |||||||
CHARMM | + | + | + | +[3] | ~[4] | CHARMM, AMBER and OPLS force fields are included in the standard CHARMM distribution | ||
chemkit | + | + | + | + | ||||
Gabedit | + | |||||||
Gaussian mm utility | + | + | DREIDING force field is also available | |||||
GROMACS | + | + | + | + | CHARMM and AMBER force fields are included in the standard Gromacs distribution since 4.5.0 | |||
HyperChem | + | + | (+)[5] | MM+ is also available | ||||
MOE | AA | 89, 94, 99 | 22, 27 | 94(s) | ||||
NAMD | + | + | + | + | ||||
StruMM3D (STR3DI32) | + | molecules and clusters | ||||||
Q | + | + | + | for biopolymers | ||||
TINKER | UA, AA, AA/L | 94, 96, 98, 99 | 19, 27 | for proteins and organic molecules | ||||
Towhee | UA, AA | 86 | 19, 22, 27 | 94 | + | Monte Carlo | ||
Yasara | 94,96,99,03 | Plus custom force fields for hires refinement | ||||||
See also
- Force field (chemistry)
- List of software for Monte Carlo molecular modeling
- Molecular mechanics
- Molecular design software
- Molecule editor
- Software for molecular mechanics modeling
- Molecular modeling on GPU
References
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