KIF1A

Kinesin family member 1A

PDB rendering based on 1i6i.

Available structures

Ortholog search: PDBe, RCSB

List of PDB id codes
4EGX, 4EJQ, 4UXO, 4UXP, 4UXR, 4UXS

Identifiers

Symbols

KIF1A ; ATSV; C2orf20; HSN2C; MRD9; SPG30; UNC104

External IDs

OMIM: 601255 MGI: 108391 HomoloGene: 99729 GeneCards: KIF1A Gene

Gene ontology
Molecular function	• motor activity • ATP binding • microtubule binding • ATP-dependent microtubule motor activity, plus-end-directed
Cellular component	• cytoplasm • kinesin complex • microtubule • neuron projection • neuronal cell body
Biological process	• anterograde axon cargo transport • metabolic process • vesicle-mediated transport
Sources: Amigo / QuickGO

Orthologs

Species

Human

Mouse

547

RefSeq (mRNA)

RefSeq (protein)

Location (UCSC)

Chr 2:
240.71 – 240.82 Mb

Chr 1:
93.02 – 93.1 Mb

PubMed search

Kinesin-like protein KIF1A, also known as axonal transporter of synaptic vesicles or microtubule-based motor KIF1A, is a protein that in humans is encoded by the KIF1A gene.^[1]^[2]^[3]

Function

KIF1A is a member of the kinesin family. This protein is highly similar to mouse heavy-chain kinesin member 1A protein, which is an anterograde motor protein that transports membranous organelles along axonal microtubules. It is thought that this protein may play a critical role in the development of axonal neuropathies resulting from impaired axonal transport. There are multiple polyadenylation sites found in this gene.^[1] Sexual orientation has been linked to the regulatory domain of the gene.^[4]

Clinical significance

KIF1A is associated with hereditary spastic paraparesis.^[5]

References

1 2 "Entrez Gene: kinesin family member 1A".
↑ Okada Y, Yamazaki H, Sekine-Aizawa Y, Hirokawa N (June 1995). "The neuron-specific kinesin superfamily protein KIF1A is a unique monomeric motor for anterograde axonal transport of synaptic vesicle precursors". Cell 81 (5): 769–80. doi:10.1016/0092-8674(95)90538-3. PMID 7539720.
↑ Keller MP, Seifried BA, Rabin BA, Chance PF (March 1999). "Mapping of the kinesin-related gene ATSV to chromosome 2q37". Hum. Genet. 104 (3): 254–6. doi:10.1007/s004390050944. PMID 10323250.
↑ Ngun, Tuck (October 8, 2015). "PgmNr 95: A novel predictive model of sexual orientation using epigenetic markers.". American Society of Human Genetics.
↑ Erlich Y, Edvardson S, Hodges E, Zenvirt S, Thekkat P, Shaag A, Dor T, Hannon GJ, Elpeleg O (April 2011). "Exome sequencing and disease-network analysis of a single family implicate a mutation in KIF1A in hereditary spastic paraparesis". Genome Res 21 (5): 658–64. doi:10.1101/gr.117143.110. PMC 3083082. PMID 21487076.

Demokan S, Chang X, Chuang A, et al. (2010). "KIF1A and EDNRB are differentially methylated in primary HNSCC and salivary rinses.". Int. J. Cancer 127 (10): 2351–9. doi:10.1002/ijc.25248. PMC 2946472. PMID 20162572.
Smith M, Escamilla JR, Filipek P, et al. (2001). "Molecular genetic delineation of 2q37.3 deletion in autism and osteodystrophy: report of a case and of new markers for deletion screening by PCR.". Cytogenet. Cell Genet. 94 (1-2): 15–22. doi:10.1159/000048775. PMID 11701947.
Kikkawa M, Hirokawa N (2006). "High-resolution cryo-EM maps show the nucleotide binding pocket of KIF1A in open and closed conformations.". EMBO J. 25 (18): 4187–94. doi:10.1038/sj.emboj.7601299. PMC 1570440. PMID 16946706.
Yu W, Andersson B, Worley KC, et al. (1997). "Large-scale concatenation cDNA sequencing.". Genome Res. 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146. PMID 9110174.
Albers M, Kranz H, Kober I, et al. (2005). "Automated yeast two-hybrid screening for nuclear receptor-interacting proteins.". Mol. Cell Proteomics 4 (2): 205–13. doi:10.1074/mcp.M400169-MCP200. PMID 15604093.
Barbe L, Lundberg E, Oksvold P, et al. (2008). "Toward a confocal subcellular atlas of the human proteome.". Mol. Cell Proteomics 7 (3): 499–508. doi:10.1074/mcp.M700325-MCP200. PMID 18029348.
Furlong RA, Zhou CY, Ferguson-Smith MA, Affara NA (1996). "Characterization of a kinesin-related gene ATSV, within the tuberous sclerosis locus (TSC1) candidate region on chromosome 9Q34.". Genomics 33 (3): 421–9. doi:10.1006/geno.1996.0217. PMID 8661001.
Koshizuka T, Kawaguchi Y, Nishiyama Y (2005). "Herpes simplex virus type 2 membrane protein UL56 associates with the kinesin motor protein KIF1A.". J. Gen. Virol. 86 (Pt 3): 527–33. doi:10.1099/vir.0.80633-0. PMID 15722511.
Hillier LW, Graves TA, Fulton RS, et al. (2005). "Generation and annotation of the DNA sequences of human chromosomes 2 and 4.". Nature 434 (7034): 724–31. doi:10.1038/nature03466. PMID 15815621.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs.". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
Bonaldo MF, Lennon G, Soares MB (1996). "Normalization and subtraction: two approaches to facilitate gene discovery.". Genome Res. 6 (9): 791–806. doi:10.1101/gr.6.9.791. PMID 8889548.
Andersson B, Wentland MA, Ricafrente JY, et al. (1996). "A "double adaptor" method for improved shotgun library construction.". Anal. Biochem. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
Strausberg RL, Feingold EA, Grouse LH, et al. (2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Shin H, Wyszynski M, Huh KH, et al. (2003). "Association of the kinesin motor KIF1A with the multimodular protein liprin-alpha.". J. Biol. Chem. 278 (13): 11393–401. doi:10.1074/jbc.M211874200. PMID 12522103.
Lee JR, Shin H, Choi J, et al. (2004). "An intramolecular interaction between the FHA domain and a coiled coil negatively regulates the kinesin motor KIF1A.". EMBO J. 23 (7): 1506–15. doi:10.1038/sj.emboj.7600164. PMC 391070. PMID 15014437.
Dias Neto E, Correa RG, Verjovski-Almeida S, et al. (2000). "Shotgun sequencing of the human transcriptome with ORF expressed sequence tags.". Proc. Natl. Acad. Sci. U.S.A. 97 (7): 3491–6. doi:10.1073/pnas.97.7.3491. PMC 16267. PMID 10737800.
Lee JR, Shin H, Ko J, et al. (2003). "Characterization of the movement of the kinesin motor KIF1A in living cultured neurons.". J. Biol. Chem. 278 (4): 2624–9. doi:10.1074/jbc.M211152200. PMID 12435738.

PDB gallery

1i6i: CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-AMPPCP

1ia0: KIF1A HEAD-MICROTUBULE COMPLEX STRUCTURE IN ATP-FORM

1i5s: CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-ADP

1vfx: Crystal Structure of the Kif1A Motor Domain Complexed With ADP-Mg-AlFx

2hxh: KIF1A head-microtubule complex structure in adp-form

2hxf: KIF1A head-microtubule complex structure in amppnp-form

1vfv: Crystal Structure of the Kif1A Motor Domain Complexed With Mg-AMPPNP

1vfw: Crystal Structure of the Kif1A Motor Domain Complexed With Mg-AMPPNP

1vfz: Crystal Structure of the Kif1A Motor Domain Complexed With ADP-Mg-VO4

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

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KIF1A

Function

Clinical significance

References

Further reading