Enaptin

Spectrin repeat containing, nuclear envelope 1
Available structures PDB Ortholog search: PDBe, RCSB List of PDB id codes 4DXR​
Identifiers
Symbols	SYNE1 ; 8B; ARCA1; C6orf98; CPG2; EDMD4; MYNE1; Nesp1; SCAR8; dJ45H2.2
External IDs	OMIM: 608441 HomoloGene: 52329 GeneCards: SYNE1 Gene
Gene ontology Molecular function • actin binding • protein binding • lamin binding • identical protein binding • protein homodimerization activity • poly(A) RNA binding • actin filament binding Cellular component • nucleus • nuclear envelope • nuclear outer membrane • nucleoplasm • cytoplasm • Golgi apparatus • cytoskeleton • integral component of membrane • sarcomere • nuclear membrane • LINC complex • postsynaptic membrane Biological process • nucleus organization • Golgi organization • establishment of nucleus localization • muscle cell differentiation • cytoskeletal anchoring at nuclear membrane • nuclear matrix anchoring at nuclear membrane Sources: Amigo / QuickGO
Orthologs
Species	Human	Mouse
Entrez	23345	64009
Ensembl	ENSG00000131018	ENSMUSG00000096054
UniProt	Q8NF91	Q6ZWR6
RefSeq (mRNA)	NM_001099267	NM_001079686
RefSeq (protein)	NP_149062	NP_001073154
Location (UCSC)	Chr 6: 152.12 – 152.64 Mb	Chr 10: 5.02 – 5.55 Mb
PubMed search

Enaptin also known as nesprin-1 or synaptic nuclear envelope protein 1 (syne-1) is a protein that in humans that is encoded by the SYNE1 gene.^[1]

Function

This gene encodes a spectrin repeat containing protein expressed in skeletal and smooth muscle, and peripheral blood lymphocytes, that localizes to the nuclear membrane.^[1]

Enaptin is a nuclear envelope protein found in human myocytes and synapses, which is made up of 8,797 amino acids. Enaptin is involved in the maintenance of nuclear organization and structural integrity, tethering the cell nucleus to the cytoskeleton by interacting with the nuclear envelope and with F-actin in the cytoplasm.

Structure

Enaptin contains a coiled alpha-helical region and a large beta-sheet region in the upper part and at least four alpha-helices spliced together, indicating the similarity with collagen. The protein is made up of three main parts, as can be seen in the diagram: cytoplasmic (1-8746), anchor for type IV membrane protein (8747-8767), and the sequence for perinuclear space (8768-8797). The region in the perinuclear space contains a KASH domain.

The molecular weight of the mature protein is approximately 1,011,041.95 Da, and it has a theoretical pI of 5.38.^[2] The protein's chemical formula is C₄₄₁₈₉H₇₁₂₅₂N₁₂₄₂₈O₁₄₀₀₇S₃₂₁. It has a theoretical Instability Index (II) of 51.63, indicating that it would be unstable in a test tube. The protein's in vivo half-life, the time it takes for half of the amount of protein in a cell to disappear after its synthesis in the cell, is predicted to be approximately 30 hours (in mammalian reticulocytes).^[3]

Clinical significance

Mutations in this gene have been associated with autosomal recessive spinocerebellar ataxia 8, also referred to as autosomal recessive cerebellar ataxia type 1 or recessive ataxia of Beauce.^[1]

References

1. "Entrez Gene: Spectrin repeat containing, nuclear envelope 1".
2. "Compute pI/Mw for SYNE1_HUMAN (Q8NF91)". ExPASy. Swiss Institute of Bioinformatics.
3. "ProtParam for SYNE1_HUMAN (Q8NF91)". ExPASy. Swiss Institute of Bioinformatics.

Further reading

• Zhang Q, Skepper JN, Yang F, Davies JD, Hegyi L, Roberts RG, Weissberg PL, Ellis JA, Shanahan CM (December 2001). "Nesprins: a novel family of spectrin-repeat-containing proteins that localize to the nuclear membrane in multiple tissues". J. Cell. Sci. 114 (Pt 24): 4485–98. PMID 11792814.
• Grady RM, Starr DA, Ackerman GL, Sanes JR, Han M (March 2005). "Syne proteins anchor muscle nuclei at the neuromuscular junction". Proc. Natl. Acad. Sci. U.S.A. 102 (12): 4359–64. doi:10.1073/pnas.0500711102. PMC 555524. PMID 15749817.

External links

• GeneReview/NCBI/NIH/UW entry on SYNE1-Related Autosomal Recessive Cerebellar Ataxia

This article incorporates text from the United States National Library of Medicine, which is in the public domain.