Software for protein structure visualization
This list of software for protein structure visualization is a compilation of bioinformatics software used to view protein structures. Such tools are commonly used in molecular biology, and bioinformatics. For example, you can look at your protein in the vmd viewer. It is necessary that you have an pdb.file to look at your 3-dimensional structure.
| NAME | Link | Author |
|---|---|---|
| BALLView | BALLView official web site | BALLView team |
| BioBlender | BioBlender official web site | SciVis team |
| Visual Molecular Dynamics | VMD official website | |
| Jmol | Jmol official web site | Jmol development team |
| Friend | Valentin Ilyin | |
| Geneious Pro (implemented Jmol viewer as part of an all-in-one sequence analysis software package) | Geneious homepage | Geneious development team |
| PyMOL | PyMOL Wiki | Warren Lyford DeLano |
| RasMol | Official website | Roger Sayle |
| UCSF Chimera | Official website | UCSF RBVI |
| STING | STAR STING | |
| VectorFriends (sequence analysis software with a Jmol viewer) | VectorFriends website | BioFriends development team |
| VisProt3DS (3D Stereoscopic view: anaglyth, side by side, hardware) | Official website | Nick Vtyurin |
| Polyview-3D (Web-based high resolution static views and animations using Pymol or Rasmol) | Official website | Aleksey Porollo & Jarek Meller |
See also
- Biological data visualization
- List of molecular graphics systems
- List of Open Source Bioinformatics software
- List of software for molecular mechanics modeling
- List of nucleic acid simulation software
- Molecular graphics
External links
- Molecular Graphics Software Links at the Protein Data Bank
- Structure Visualization & Analysis programs at the SBGrid Consortium
This article is issued from Wikipedia - version of the Thursday, February 25, 2016. The text is available under the Creative Commons Attribution/Share Alike but additional terms may apply for the media files.