HDAC11

Histone deacetylase 11
Identifiers
Symbols	HDAC11 ; HD11
External IDs	OMIM: 607226 MGI: 2385252 HomoloGene: 11743 IUPHAR: 2615 ChEMBL: 3310 GeneCards: HDAC11 Gene
EC number	3.5.1.98
Gene ontology Molecular function • histone deacetylase activity • transcription factor binding • NAD-dependent histone deacetylase activity (H3-K14 specific) Cellular component • histone deacetylase complex • nucleus • plasma membrane • extracellular exosome Biological process • transcription, DNA-templated • regulation of transcription, DNA-templated • oligodendrocyte development • chromatin modification • histone deacetylation • histone H3 deacetylation Sources: Amigo / QuickGO
RNA expression pattern
More reference expression data
Orthologs
Species	Human	Mouse
Entrez	79885	232232
Ensembl	ENSG00000163517	ENSMUSG00000034245
UniProt	Q96DB2	Q91WA3
RefSeq (mRNA)	NM_001136041	NM_144919
RefSeq (protein)	NP_001129513	NP_659168
Location (UCSC)	Chr 3: 13.48 – 13.51 Mb	Chr 6: 91.16 – 91.17 Mb
PubMed search

Histone deacetylase 11 is a 39kDa histone deacetylase enzyme that in humans is encoded by the HDAC11 gene on chromosome 3 in humans and chromosome 6 in mice.^[1][2]

It is the only Class IV HDAC since it is not highly homologous with either Rpd3 or hda1 yeast enzymes and so does not fit into either Class I or Class II.^[3] It is the smallest HDAC isoform and it was first described in 2002.

Function

Histone deacetylases, such as HDAC11, control DNA expression by modifying the core histone octamers that package DNA into dense chromatin structures and repress gene expression.[supplied by OMIM]^[2]

HDAC11 expression is normally found in brain and testis tissue, but upregulation of HDAC11 expression has also been seen in various cancer cells.

HDAC11 has been shown to be a negative regulator of IL-10 production in antigen presenting cells. It has also been shown that inhibition of HDAC11 results in increased expression of OX40L in Hodgkin lymphoma cells.

Interactions

HDAC11 has been shown to interact with HDAC6.^[1]

See also

• Histone deacetylase

References

1. Gao L, Cueto MA, Asselbergs F, Atadja P (Jul 2002). "Cloning and functional characterization of HDAC11, a novel member of the human histone deacetylase family". The Journal of Biological Chemistry 277 (28): 25748–55. doi:10.1074/jbc.M111871200. PMID 11948178.
2. "Entrez Gene: HDAC11 histone deacetylase 11".
3. Yang XJ, Seto E (Mar 2008). "The Rpd3/Hda1 family of lysine deacetylases: from bacteria and yeast to mice and men". Nature Reviews Molecular Cell Biology 9 (3): 206–18. doi:10.1038/nrm2346. PMID 18292778.

Further reading

• Verdin E, Dequiedt F, Kasler HG (May 2003). "Class II histone deacetylases: versatile regulators". Trends in Genetics 19 (5): 286–93. doi:10.1016/S0168-9525(03)00073-8. PMID 12711221.
• Hartley JL, Temple GF, Brasch MA (Nov 2000). "DNA cloning using in vitro site-specific recombination". Genome Research 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
• Simpson JC, Wellenreuther R, Poustka A, Pepperkok R, Wiemann S (Sep 2000). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Reports 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC 1083732. PMID 11256614.
• Wiemann S, Arlt D, Huber W, Wellenreuther R, Schleeger S, Mehrle A, Bechtel S, Sauermann M, Korf U, Pepperkok R, Sültmann H, Poustka A (Oct 2004). "From ORFeome to biology: a functional genomics pipeline". Genome Research 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
• Voelter-Mahlknecht S, Ho AD, Mahlknecht U (Oct 2005). "Chromosomal organization and localization of the novel class IV human histone deacetylase 11 gene". International Journal of Molecular Medicine 16 (4): 589–98. doi:10.3892/ijmm.16.4.589. PMID 16142391.
• Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M (Oct 2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature 437 (7062): 1173–8. doi:10.1038/nature04209. PMID 16189514.
• Mehrle A, Rosenfelder H, Schupp I, del Val C, Arlt D, Hahne F, Bechtel S, Simpson J, Hofmann O, Hide W, Glatting KH, Huber W, Pepperkok R, Poustka A, Wiemann S (Jan 2006). "The LIFEdb database in 2006". Nucleic Acids Research 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.
• Lindberg D, Akerström G, Westin G (Jan 2007). "Mutational analyses of WNT7A and HDAC11 as candidate tumour suppressor genes in sporadic malignant pancreatic endocrine tumours". Clinical Endocrinology 66 (1): 110–4. doi:10.1111/j.1365-2265.2006.02694.x. PMID 17201809.

External links

• HDAC11 protein, human at the US National Library of Medicine Medical Subject Headings (MeSH)

This article incorporates text from the United States National Library of Medicine, which is in the public domain.