Turnip crinkle virus (TCV) repressor of minus strand synthesis H5

Turnip crinkle virus (TCV) repressor of minus strand synthesis H5
Predicted secondary structure and sequence conservation of TCV_H5
Identifiers
Symbol TCV_H5
Rfam RF00500
Other data
RNA type Cis-reg
Domain(s) Viruses
SO 0000233

The TCV hairpin 5 (H5) is an RNA element found in the turnip crinkle virus. This RNA element is composed of a stem-loop that contains a large symmetrical internal loop (LSL). H5 can repress minus-strand synthesis when the 3' side of the LSL pairs with the 4 bases at the 3'-terminus of the RNA(GCCC-OH).[1][2]

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